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2006 Yamaha FJR1300AS Overview, Reviews, Ratings & Specs

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Eugene S | December 24, 2025
The 2006 Yamaha FJR1300AS is a sport touring motorcycle that has been a favorite among long-distance riders since its introduction. Known for its comfortable ergonomics, powerful engine, and robust build, it’s a capable machine for both commuting and cross-country adventures. This model year is part of the FJR1300 lineup which has seen continuous production. Its primary appeal lies in its blend of performance and long-haul comfort, making it a popular choice for discerning riders.
The Good

The 2006 FJR1300AS boasts a thrilling yet manageable power delivery, legendary Yamaha reliability, and exceptional long-distance comfort. Its aerodynamic design reduces fatigue, offering a practical and enjoyable riding experience that satisfies both the desire for performance and the need for dependable touring.

The Bad

Owners often note the FJR1300AS can run hot in slow traffic, and some find the stock seat less than ideal for very long days. Early models, including the 2006, could experience charging system issues, and the clutch pull might feel heavy to some riders.

2006 Yamaha FJR1300AS: Quick Overview

  • Engine: Liquid-cooled, 16-valve, DOHC, 1299cc inline-four cylinder.
  • Horsepower: Approximately 140-145 hp at the crankshaft.
  • Torque: Around 97-100 lb-ft at the crankshaft.
  • Fuel Economy: Typically in the range of 35-45 mpg, depending on riding style and conditions.
  • 0-60 mph: Estimated to be in the low 3-second range.
  • Top Speed: Capable of speeds well over 140 mph.
  • Towing Capacity: Not applicable; motorcycles are not designed for towing.
  • Transmission: 5-speed constant mesh gearbox with hydraulic clutch.
  • Final Drive: Shaft drive.
  • Suspension:
    • Front: 48mm telescopic fork, adjustable preload and rebound damping.
    • Rear: Single shock, adjustable preload and rebound damping.
  • Brakes:
    • Front: Dual 298mm hydraulic disc brakes with 4-piston calipers.
    • Rear: Single 282mm hydraulic disc brake with 2-piston caliper.
  • Wheelbase: Approximately 57.1 inches.
  • Rake/Trail: 26 degrees / 4.4 inches.
  • Weight: Approximately 584 lbs (wet).
  • Fuel Capacity: 6.6 gallons.
  • Trim-Level Features (2006 AS specific): The AS designation typically indicated the inclusion of a Semi-Automatic transmission, which was a key feature for this model year. This system allowed for clutchless shifting of gears, offering a unique riding experience. Other standard features often included integrated hard luggage, adjustable windscreen, comfortable touring seat, and comprehensive instrumentation.

2006 Yamaha FJR1300AS Specifications

Vehicle Information
Year 2006
Make Yamaha
Model FJR1300AS
Trim -
Style -
Type Motorcycle
Category Motorcycle
Manufacturing Details
Made In Japan
Manufacturing City HAMAMATSU
Dimensions
Doors -
Curb Weight -
Gross Vehicle Weight Rating -
Overall Height -
Overall Length -
Overall Width -
Wheelbase Length -
Standard Seating -
Engine & Performance
Engine 1300CC
Engine Size 1300L
Engine Cylinders 4
Transmission -
Transmission Type -
Transmission Speeds -
Drivetrain -
Additional Features
Anti-Brake System -
Steering Type -
Pricing
Manufacturer Suggested Retail Price (MSRP) -
Invoice Price -
Delivery Charges -

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What Problems Does the 2006 Yamaha FJR1300AS Have?

The 2006 Yamaha FJR1300AS, like many complex motorcycles, has a few reported issues and potential long-term concerns that owners should be aware of. One of the more frequently discussed issues, particularly in earlier FJR models including 2006, relates to the charging system. Some owners have experienced premature failure of the stator or regulator/rectifier, leading to battery drain and potential inability to charge the battery. This can manifest as warning lights or a dead battery. It is often recommended to inspect these components and consider upgrading them with more robust aftermarket solutions, especially if the bike has high mileage.

Another point of note for the 2006 model, and a characteristic of the FJR line in general, is its tendency to run warm, especially in slow-moving traffic or hot weather. While not a mechanical failure, it can lead to rider discomfort. Proper ventilation and ensuring the cooling system is in good order can mitigate this.

The semi-automatic transmission on the AS model, while a convenience, has generally proven reliable, but as with any complex system, maintenance is key. Ensuring proper fluid levels and adherence to any specific service intervals for the transmission is important.

While Yamaha is known for reliability, specific to the 2006 FJR1300AS, there haven't been widespread, catastrophic recalls. However, owners should always check for any outstanding safety recalls with Yamaha using the VIN. Generally, the FJR1300 platform is lauded for its robust engine and drivetrain, meaning that with diligent maintenance, many of these bikes can achieve high mileage. The key to long-term reliability is consistent oil changes, proper drivetrain lubrication, and addressing any minor issues promptly. The core mechanicals of the FJR1300 are very durable.

How long will the 2006 Yamaha FJR1300AS last?

The 2006 Yamaha FJR1300AS is renowned for its exceptional long-term durability. With regular and diligent maintenance, it's not uncommon for these motorcycles to surpass 100,000 miles and continue to be ridden reliably. Owners who prioritize consistent oil changes, shaft drive lubrication, and timely attention to the charging system can expect many years of service. The core engine and drivetrain are over-engineered for their purpose, making them resilient to the rigors of long-distance touring. Weaknesses that can emerge over time, often after 50,000 miles, include potential charging system component wear and the need for suspension servicing, but these are generally manageable with proactive maintenance rather than indicative of inherent flaws.

What Technology & Safety Features are Included?

The 2006 Yamaha FJR1300AS is a sport-touring motorcycle that prioritizes function and rider engagement over extensive electronic gadgetry. Built-in technology is relatively straightforward, focusing on rider information and control. The instrument cluster features prominent analog gauges for the tachometer and speedometer, complemented by a digital display for odometer, trip meters, fuel level, and ambient temperature. A clock is also included.

The AS model is distinguished by its semi-automatic transmission, which eliminates the need for a clutch lever for gear changes. This system allows the rider to select gears using buttons on the handlebar, providing a unique and convenient riding experience, especially in stop-and-go traffic or during spirited riding.

Safety features are primarily mechanical. The FJR1300AS is equipped with robust anti-lock braking system (ABS) for both the front and rear wheels, significantly enhancing stopping power and stability in various conditions. The front braking system utilizes dual discs with powerful multi-piston calipers, while the rear features a single disc. Aerodynamic aids include an electrically adjustable windscreen, which can be raised or lowered on the fly to optimize wind protection and reduce rider fatigue on long journeys. Integrated saddlebags provide practical storage, further enhancing its touring capabilities.

Entertainment features are minimal by modern automotive standards; the focus is on the riding experience itself. There is no integrated audio system or connectivity. Driver-assistance features are also absent, as is typical for motorcycles of this era.

Crash-test ratings are not applicable to motorcycles in the same way they are for cars. However, the FJR1300 is designed with rider safety in mind, incorporating strong chassis construction and advanced braking systems. Optional features would typically be aftermarket additions such as heated grips, GPS units, or different seat options.

What Colors Options are Available?

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2006 Yamaha FJR1300AS Prices and Market Value

When new, the 2006 Yamaha FJR1300AS likely retailed in the range of $14,000 to $15,000 USD, reflecting its premium sport-touring position. Depreciation on the FJR1300AS has been moderate. While it has lost significant value from its original MSRP, well-maintained examples hold their value relatively well within the used motorcycle market compared to some other brands. Current used market prices for a 2006 FJR1300AS typically range from $4,500 to $7,500, heavily influenced by mileage, condition, maintenance history, and the presence of desirable accessories or upgrades. Factors significantly affecting resale value include the condition of the paint and bodywork, the operational status of the semi-automatic transmission, and evidence of regular servicing.

2006 Yamaha FJR1300AS Cost of Ownership

Owning a 2006 Yamaha FJR1300AS is moderately economical for its class. Insurance costs will vary based on rider profile and location but are generally reasonable for a sport-tourer. Fuel consumption averages 35-45 mpg, making it relatively efficient for a 1300cc motorcycle. Routine maintenance, including oil changes and shaft drive lubrication, is straightforward and affordable. Repairs, particularly for less common issues like charging system components, can be moderately expensive. However, the overall reliability and durability mean that major, unexpected repairs are infrequent with proper care, making it a cost-effective choice for long-term ownership.

2006 Yamaha FJR1300AS Fuel Efficiency

Fuel Type Gasoline
Fuel Capacity -
City Mileage -
Highway Mileage -

2006 Yamaha FJR1300AS Warranty

Basic
Original warranty 0 months / No data
Estimated remaining Expired
Powertrain
Original warranty 0 months / No data
Estimated remaining Expired
Rust
Original warranty 0 months / No data
Estimated remaining Expired

2006 Yamaha FJR1300AS Insurance

Insurance for a 2006 Yamaha FJR1300AS is moderately priced, reflecting its status as a Motorcycle with strong safety ratings and
reasonable repair costs.

How Does the 2006 Yamaha FJR1300AS Compare to Other Motorcycle?

The 2006 Yamaha FJR1300AS sits in the premium sport-touring segment, facing competition from models like the Honda ST1300, Kawasaki Concours 14, and BMW R 1200 RT.

Performance: The FJR1300AS offers a potent 1299cc inline-four engine delivering strong, linear power ideal for comfortable highway cruising and brisk acceleration. The Honda ST1300 boasts a similarly smooth V4 engine, known for its refinement and touring prowess. The Kawasaki Concours 14, with its supercharged engine, offers significantly more raw power and acceleration, often outperforming the FJR. The BMW R 1200 RT, with its boxer twin, provides a more relaxed, torquey feel.

Features: The FJR1300AS stands out with its semi-automatic transmission, a unique feature at the time, and integrated hard luggage. The ST1300 is known for its excellent wind protection and integrated luggage. The Concours 14 often includes advanced features like linked ABS and adjustable fairings. The R 1200 RT offers BMW's characteristic rider aids and excellent ergonomics.

Reliability: Yamaha has a stellar reputation for reliability, and the FJR1300 is no exception, generally considered very robust. Honda's ST1300 is equally if not more renowned for bulletproof reliability. Kawasaki's Concours 14, while powerful, has had some reported issues with its clutch and charging system in earlier years. BMW motorcycles often have more complex electronics that can lead to higher repair costs, though their engines are typically reliable.

Price: In 2006, the FJR1300AS was competitively priced against its rivals. Today, used FJR1300AS models offer excellent value, often being more affordable than comparable used ST1300s or R 1200 RTs, especially considering their performance and features. The Concours 14, being newer and more powerful, often commands higher used prices.

Alternatives:
* Honda ST1300: A very similar, if not more refined, alternative if a clutch-free experience isn't a priority. Offers exceptional comfort and reliability.
* Kawasaki Concours 14: If raw power and modern features are paramount, the Concours 14 is a step up in performance but also typically costs more.
* BMW R 1200 RT: For those seeking a more European touring experience with a different engine character and potentially more sophisticated tech (in later models), the RT is a strong contender, though likely more expensive to maintain.

The FJR1300AS remains a compelling choice for its blend of performance, comfort, reliability, and increasingly attractive used market value, especially for riders who appreciate its unique semi-automatic transmission.

Final Verdict: Is the 2006 Yamaha FJR1300AS a Good Motorcycle?

The 2006 Yamaha FJR1300AS is an excellent choice for experienced riders seeking a comfortable, capable, and reliable sport-touring machine for long-distance travel and spirited riding. Its semi-automatic transmission makes it particularly appealing for those who want to reduce fatigue in traffic or enjoy a unique riding experience. It is definitely worth buying on the used market, provided it has been well-maintained. Buyers should pay close attention to the charging system's condition and seek examples with complete service history. While rarely available new anymore, a well-cared-for used FJR1300AS represents significant value and offers a rewarding ownership experience for the discerning motorcyclist.

2006 Yamaha FJR1300AS Owner Reviews

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Eugene S

Eugene is an automotive enthusiast with over 15 years of experience in the used car market. As a writer at VINCheck.info, he brings deep industry insight and a passion for cars, helping readers make smart, informed decisions. Eugene has written hundreds of used car reviews and is known for breaking down complex automotive topics into clear, actionable advice. Over the years, he has driven and worked on a wide range of vehicles—starting with tuning street cars in his early days and eventually focusing on performance upgrades and reliability improvements. Today, he specializes in evaluating used vehicles through the lens of real-world ownership and enthusiast needs. A longtime fan of Porsche, Eugene especially appreciates vehicles that blend durability with driving enjoyment.